Print an `hbr_blocks` result
Usage
# S3 method for class 'hbr_blocks'
print(x, ...)Examples
toy <- system.file("extdata", "hgsi_toy", package = "HaploBreedR")
if (nzchar(toy) && dir.exists(toy) &&
requireNamespace("BEDMatrix", quietly = TRUE)) {
run <- hbr_read_results(file.path(toy, "trait_YLD"))
print(hbr_haplotype_blocks(
run, plink_prefix = file.path(toy, "geno_toy"),
method = "recomb"))
}
#> using bundled rice genetic map (Harushima 1998 / RGP); pass `genetic_map = "none"` to disable
#> 2 target haplotypes in 2 blocks (method recomb; map: bundled rice genetic map (Nagamura et al. 1997, n = 1659 markers))
#> block chr start_cM end_cM n_genes panel_freq
#> HB001 2 0.0 0.0 1 0.1667
#> HB002 3 1.1 1.1 1 0.3333
#> target haplotypes per block: 1: 2 | 2: 0 | 3: 0 | 4: 0 | 5+: 0
